Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3512: glutamate 5-kinase
is similar to:

Ga0059261_3512: glutamate 5-kinase (EC from Sphingomonas koreensis

100% id,
100% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC from Escherichia coli
proB: glutamate 5-kinase; EC from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC from Escherichia coli
P0A7B5: glutamate 5-kinase (EC from Escherichia coli

39% id,
98% cov

Q6E235: glutamate 5-kinase (EC from Bacillus subtilis

37% id,
96% cov


Ga0059261_2506: glutamate-5-semialdehyde dehydrogenase (EC
is similar to:

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC; EC from Oryza sativa

39% id,
58% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC; EC from Arabidopsis thaliana

40% id,
56% cov

P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC; EC from Homo sapiens
ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC; EC from Homo sapiens

40% id,
52% cov


Ga0059261_0186: uridylate kinase (EC
is similar to:

CA265_RS20855: glutamate 5-kinase (EC from Pedobacter sp.

22% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory