Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3133: UTP--glucose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

51% id,
99% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

48% id,
99% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

42% id,
97% cov

Ga0059261_3663: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

28% id,
89% cov

Ga0059261_4025: Nucleotidyl transferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

26% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory