Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 3 curated entries in PaperBLAST's database that match '3.1.1.110' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1893: Gluconolactonase
is similar to:
PaperBLAST

XYLC_CAUVC / Q9A9Z1: D-xylonolactone lactonase; Xylono-1,5-lactonase; EC 3.1.1.110 from Caulobacter vibrioides
xylC / A0A0H3C6P8: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides
Q9A9Z1: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides

47% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory