Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2035: histidinol-phosphatase, inositol monophosphatase family
is similar to:
PaperBLAST

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

100% id,
100% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

58% id,
96% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

48% id,
98% cov

More...

Ga0059261_0715: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

34% id,
96% cov

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

30% id,
97% cov

HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum
hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum
Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

33% id,
89% cov

More...

Ga0059261_0609: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

30% id,
98% cov

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

30% id,
95% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

29% id,
98% cov

More...

Ga0059261_0811: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

32% id,
88% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

28% id,
100% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

30% id,
95% cov

More...

Ga0059261_1044: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
is similar to:
PaperBLAST

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

53% id,
53% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

53% id,
53% cov

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

54% id,
50% cov

More...

Ga0059261_4040: 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

30% id,
88% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

29% id,
89% cov

Q8NS79: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

27% id,
89% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1078958-1079587 (frame +2) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli
Also see hits to annotated proteins above

51% id,
56% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
Also see hits to annotated proteins above

51% id,
56% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory