Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1581: Glycosidases
is similar to:
PaperBLAST

Ga0059261_1581: Maltose or maltodextrin glucosidase (EC 3.2.1.20) from Sphingomonas koreensis

100% id,
100% cov

AAL05573.1: α-glucosidase (AglB;AglA;BAD_0452) (EC 3.2.1.20)

25% id,
68% cov

CAA83995.1: α-glucosidase (Ima5;IMA5;YJL216c) (EC 3.2.1.20)

26% id,
63% cov

More...

Ga0059261_1580: Glycosidases
is similar to:
PaperBLAST

BAL49684.1: α-glucosidase (AglA;HaG) (EC 3.2.1.20)

49% id,
100% cov

Q9Z3R8: alpha-glucosidase (EC 3.2.1.20) from Sinorhizobium meliloti

53% id,
90% cov

Shewana3_2311: Alpha-glucosidase (EC 3.2.1.20) from Shewanella sp.

52% id,
92% cov

More...

Ga0059261_1579: Glycosyl-hydrolase 97 N-terminal/Glycosyl-hydrolase 97 C-terminal, oligomerisation/Glycoside hydrolase 97
is similar to:
PaperBLAST

AEW20125.1: α-glucosidase (SusB;Aglu;BFO_2272) (EC 3.2.1.20)

43% id,
95% cov

Ga0059261_2312: Alpha-glucosidases, family 31 of glycosyl hydrolases
is similar to:
PaperBLAST

AAO78405.1: α-glucosidase (BT3299;BT_3299) (EC 3.2.1.20)

34% id,
96% cov

Q745T6: alpha-glucosidase (EC 3.2.1.20) from Thermus thermophilus

36% id,
90% cov

AAM23323.1: α-glucosidase (GluA;TTE0006) (EC 3.2.1.20)
Q8RDL1: alpha-glucosidase (EC 3.2.1.20) from Caldanaerobacter subterraneus

38% id,
83% cov

More...

Ga0059261_3191: Glycosyltransferases involved in cell wall biogenesis
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

28% id,
94% cov

Ga0059261_0606: Glycosyltransferases involved in cell wall biogenesis
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

25% id,
50% cov

Ga0059261_0775: Alpha-L-rhamnosidase N-terminal domain/Bacterial alpha-L-rhamnosidase
is similar to:
PaperBLAST

AAA57881.1: α-glucosidase (YgjK;EcYgjK;b3080) (EC 3.2.1.20|3.2.1.84)
ACB04164.1: ECDH10B_3255 (EC 3.2.1.20|3.2.1.84)
BAE77130.1: ECK3070:JW3051:b3080 (YgjK) (EC 3.2.1.20|3.2.1.84)

28% id,
18% cov

Ga0059261_1990: Methyltransferase domain
is similar to:
PaperBLAST

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

43% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory