Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 45 curated entries in PaperBLAST's database that match '3.2.1.80' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1778: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

AFE82292.1: inulinase (InuA;InuAJB13) (EC 3.2.1.80)

70% id,
98% cov

AAK00768.2: exoinulinase (EC 3.2.1.80)

40% id,
98% cov

INUE_ASPFI / E1ABX2: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus ficuum
INUE_ASPNG / Q76HP6: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus niger
BAD01476.1: exo-inulinase (InuE) (EC 3.2.1.80)

39% id,
97% cov

More...

Ga0059261_1780: Glycosyl hydrolases family 32 N-terminal domain
is similar to:
PaperBLAST

INUE_ASPNC / A2R0E0: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus niger
ABB59682.1: exo-inulinase E (InuE;Inu1;An12g08280) (EC 2.4.1.99|3.2.1.80)

30% id,
40% cov

INUE_ASPFI / E1ABX2: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus ficuum
INUE_ASPNG / Q76HP6: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus niger
BAD01476.1: exo-inulinase (InuE) (EC 3.2.1.80)

30% id,
40% cov

INUE_ASPAW / Q96TU3: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus awamori
CAC44220.1: exo-inulinase (Inu1) (EC 3.2.1.80)
Q96TU3: fructan beta-fructosidase (EC 3.2.1.80) from Aspergillus awamori

30% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory