Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 14 curated entries in PaperBLAST's database that match '3.5.1.68' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3962: N-formylglutamate amidohydrolase
is similar to:
PaperBLAST

Ga0059261_3962: N-formylglutamate deformylase (EC 3.5.1.68) from Sphingomonas koreensis

100% id,
100% cov

PGA1_c36330: N-formylglutamate deformylase (EC 3.5.1.68) from Phaeobacter inhibens

48% id,
97% cov

SM_b21164: N-formylglutamate deformylase (EC 3.5.1.68) from Sinorhizobium meliloti

47% id,
97% cov

More...

Ga0059261_1570: N-formylglutamate amidohydrolase
is similar to:
PaperBLAST

Ac3H11_2548: N-formylglutamate deformylase (EC 3.5.1.68) from Acidovorax sp.

31% id,
95% cov

Pf6N2E2_3797: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

31% id,
92% cov

PfGW456L13_316: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

30% id,
92% cov

More...

Ga0059261_4215: Predicted N-formylglutamate amidohydrolase
is similar to:
PaperBLAST

SM_b21164: N-formylglutamate deformylase (EC 3.5.1.68) from Sinorhizobium meliloti

27% id,
80% cov

Ac3H11_2548: N-formylglutamate deformylase (EC 3.5.1.68) from Acidovorax sp.

28% id,
75% cov

RR42_RS16895: N-formylglutamate deformylase (EC 3.5.1.68) from Cupriavidus basilensis

27% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory