Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 18 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1981: Peptidylarginine deiminase and related enzymes is similar to:	PaperBLAST
A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	36% id, 95% cov
AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa aguA / Q9I6J9: agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa Q9I6J9: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	35% id, 95% cov
AO356_10030: Agmatine deiminase (EC 3.5.3.12) from Pseudomonas fluorescens	35% id, 95% cov
A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes	35% id, 96% cov
AGUA_MEDTR / G7JT50: Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula	33% id, 95% cov
Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori	32% id, 98% cov
AGUA_ARATH / Q8GWW7: Agmatine deiminase; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873; EC 3.5.3.12 from Arabidopsis thaliana At5g08170 / Q8GWW7: agmatine iminohydrolase (EC 3.5.3.12) from Arabidopsis thaliana	33% id, 93% cov
aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori	31% id, 98% cov
Q5KR05: agmatine deiminase (EC 3.5.3.12) from Selenomonas ruminantium	32% id, 95% cov
AGUA_ENTFA / Q837U5: Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis Q837U5: agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis	31% id, 95% cov
C8J_0892 / A0A5Y8XU16: agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni	30% id, 97% cov
Q0P9V0: agmatine deiminase (EC 3.5.3.12) from Campylobacter jejuni	30% id, 97% cov
A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	32% id, 89% cov
S0F349: agmatine deiminase (EC 3.5.3.12) from Lactococcus cremoris	30% id, 64% cov
A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes	39% id, 28% cov
S0F349: agmatine deiminase (EC 3.5.3.12) from Lactococcus cremoris	48% id, 19% cov
AGUA_ENTFA / Q837U5: Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis Q837U5: agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis	46% id, 19% cov
More...

Ga0059261_1088: Flagellar hook capping protein is similar to:	PaperBLAST
A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa	27% id, 27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory