Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3965: formimidoylglutamate deiminase (EC 3.5.3.13)
is similar to:
PaperBLAST

SMc00673: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Sinorhizobium meliloti

52% id,
98% cov

HUTF_PSEAE / Q9HU77: Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa
Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13) from Pseudomonas aeruginosa

51% id,
99% cov

hutF / Q4KJP1: formiminoglutamate deiminase subunit (EC 3.5.3.13) from Pseudomonas fluorescens

49% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory