Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 56 curated entries in PaperBLAST's database that match '4.1.1.19' as complete word(s).

These curated entries have 40 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2051: diaminopimelate decarboxylase is similar to:	PaperBLAST
O25176: arginine decarboxylase (EC 4.1.1.19) from Helicobacter pylori	26% id, 51% cov
Q9M7K9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	21% id, 57% cov
B3Y023: arginine decarboxylase (EC 4.1.1.19) from Prunus persica	25% id, 46% cov
speA / Q9HUX1: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Pseudomonas aeruginosa Q9HUX1: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa A0A0H2ZHZ8: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa	27% id, 42% cov
SPEA_ECOLI / P21170: Biosynthetic arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli SpeA / b2938: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Escherichia coli speA / P21170: biosynthetic arginine decarboxylase (EC 4.1.1.19) from Escherichia coli P21170: arginine decarboxylase (EC 4.1.1.19) from Escherichia coli	26% id, 45% cov
ADC1A_TOBAC / A0A1S3YCW2: Arginine decarboxylase 1A, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	23% id, 50% cov
Q8ZHG8: arginine decarboxylase (EC 4.1.1.19) from Yersinia pestis	26% id, 45% cov
A0A076IP90: arginine decarboxylase (EC 4.1.1.19) from Phocaeicola dorei	23% id, 50% cov
P72587: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp.	23% id, 49% cov
Psest_3366: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas stutzeri	28% id, 40% cov
Q9LDM9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	21% id, 51% cov
Pf1N1B4_1296: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas fluorescens	26% id, 40% cov
SPE1_ORYSJ / Q9SNN0: Arginine decarboxylase 1; ARGDC1; OsADC1; EC 4.1.1.19 from Oryza sativa Q9SNN0: arginine decarboxylase (EC 4.1.1.19) from Oryza sativa	26% id, 40% cov
Q39827: arginine decarboxylase (EC 4.1.1.19) from Glycine max	23% id, 43% cov
Q71S28: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	21% id, 46% cov
F6KDF0: arginine decarboxylase (EC 4.1.1.19) from Citrus trifoliata	24% id, 39% cov
Q8YRP3: arginine decarboxylase (EC 4.1.1.19) from Nostoc sp.	27% id, 36% cov
SPE1_ARATH / Q9SI64: Arginine decarboxylase 1, chloroplastic; ADC 1; ADC-O; ARGDC 1; AtADC1; EC 4.1.1.19 from Arabidopsis thaliana Q9SI64: arginine decarboxylase (EC 4.1.1.19) from Arabidopsis thaliana	25% id, 37% cov
SPE2_ARATH / O23141: Arginine decarboxylase 2; ADC 2; ARGDC 2; AtADC2; ADC-N; EC 4.1.1.19 from Arabidopsis thaliana O23141: arginine decarboxylase (EC 4.1.1.19) from Arabidopsis thaliana	24% id, 38% cov
Q5R1Y5: arginine decarboxylase (EC 4.1.1.19) from Malus domestica	24% id, 36% cov
MADC2 / Q9M618: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	27% id, 28% cov
ADC1B_TOBAC / A0A1S3WYR7: Arginine decarboxylase 1B, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	24% id, 31% cov
P74576: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp.	26% id, 27% cov
MADC3 / Q9M617: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	25% id, 26% cov
ADC / Q43075: arginine decarboxylase (EC 4.1.1.19) from Pisum sativum	24% id, 25% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory