Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 10 curated entries in PaperBLAST's database that match '4.1.1.45' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0527: Predicted metal-dependent hydrolase of the TIM-barrel fold
is similar to:
PaperBLAST

ACMSD_MOUSE / Q8R519: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Mus musculus
Q8R519: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Mus musculus

23% id,
99% cov

ACMSD_HUMAN / Q8TDX5: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Homo sapiens
ACMSD / Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens
Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens

24% id,
96% cov

ACMSD_RAT / Q8R5M5: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Rattus norvegicus
Q8R5M5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Rattus norvegicus

25% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory