Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2028: L-threonine aldolase (EC
is similar to:

PfGW456L13_1114: L-threonine aldolase (EC from Pseudomonas fluorescens

45% id,
98% cov

Q88R13: L-threonine aldolase (EC from Pseudomonas putida

45% id,
98% cov

AO353_07670: L-threonine aldolase (EC from Pseudomonas fluorescens

44% id,
98% cov

Ga0059261_3508: 7-keto-8-aminopelargonate synthetase and related enzymes
is similar to:

Q9X266: L-threonine aldolase (EC from Thermotoga maritima

26% id,
79% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory