Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 53 curated entries in PaperBLAST's database that match '4.2.1.12'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_0354: 6-phosphogluconate dehydratase (EC 4.2.1.12) is similar to: | PaperBLAST |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 63% id, 100% cov |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 57% id, 99% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 56% id, 99% cov |
| Ga0059261_0238: tryptophan synthase, beta subunit is similar to: | PaperBLAST |
trpB / Q9YGB0: tryptophan synthase β subunit (EC 4.2.1.122) from Thermococcus kodakarensis | 59% id, 98% cov |
trpB1 / P50909: β subunit of tryptophan synthase (EC 4.2.1.122) from Thermotoga maritima | 60% id, 97% cov |
TrpB / b1261: tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli | 56% id, 97% cov |
| Ga0059261_4216: Dihydroxyacid dehydratase/phosphogluconate dehydratase is similar to: | PaperBLAST |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 32% id, 88% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 31% id, 84% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 31% id, 82% cov |
| Ga0059261_2649: Dihydroxyacid dehydratase/phosphogluconate dehydratase is similar to: | PaperBLAST |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 29% id, 90% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 27% id, 88% cov |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 27% id, 84% cov |
| Ga0059261_0239: tryptophan synthase, alpha chain (EC 4.2.1.20) is similar to: | PaperBLAST |
A0A2U8JPY3: tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (EC 4.2.1.20) from Psilocybe cubensis | 36% id, 38% cov |
| Ga0059261_3665: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) is similar to: | PaperBLAST |
G8UQI0: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Tannerella forsythia | 29% id, 43% cov |
| Ga0059261_1644: Predicted phosphosugar isomerases is similar to: | PaperBLAST |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 24% id, 35% cov |
| Ga0059261_2962: Pectic acid lyase is similar to: | PaperBLAST |
LUP1_ARATH / Q9C5M3: Lupeol synthase 1; AtLUP1; (S)-2,3-epoxysqualene synthase; Beta-amyrin synthase; Germanicol synthase; Lupan-3-beta,20-diol synthase; EC 5.4.99.41; EC 4.2.1.128; EC 5.4.99.39; EC 5.4.99.34 from Arabidopsis thaliana | 33% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory