Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.44' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0553: Sugar phosphate isomerases/epimerases
is similar to:
PaperBLAST

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

29% id,
64% cov

PGA1_c07270: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Phaeobacter inhibens

29% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory