Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 10 curated entries in PaperBLAST's database that match '4.2.1.6' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_2649: Dihydroxyacid dehydratase/phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 43% id, 99% cov |
Ga0059261_4216: Dihydroxyacid dehydratase/phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 32% id, 92% cov |
Ga0059261_0354: 6-phosphogluconate dehydratase (EC 4.2.1.12) is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 30% id, 87% cov |
Ga0059261_2635: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 26% id, 89% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 31% id, 70% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 70% cov |
Ga0059261_1669: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 21% id, 89% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 24% id, 72% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 22% id, 74% cov |
Ga0059261_1631: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 32% id, 56% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 33% id, 55% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 36% id, 49% cov |
Ga0059261_2661: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 28% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1711673-1712956 (frame +2) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 31% id, 99% cov |
Lawrence Berkeley National Laboratory