Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_2635: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
RHMD_SPHSS / Q1NEI8: L-rhamnonate dehydratase; RhamD; SpLRA3; EC 4.2.1.90 from Sphingomonas sp. | 83% id, 99% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 75% id, 99% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 64% id, 100% cov |
| Ga0059261_2974: Altronate dehydratase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 35% id, 93% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 35% id, 75% cov |
| Ga0059261_2661: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 26% id, 83% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 28% id, 69% cov |
| Ga0059261_1669: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 22% id, 91% cov |
RHMD_SALTY / Q8ZNF9: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Salmonella typhimurium | 32% id, 21% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 41% id, 11% cov |
| Ga0059261_1631: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily is similar to: | PaperBLAST |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 30% id, 36% cov |
RHMD_SPHSS / Q1NEI8: L-rhamnonate dehydratase; RhamD; SpLRA3; EC 4.2.1.90 from Sphingomonas sp. | 41% id, 26% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 33% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory