Curated BLAST
Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 19 curated entries in PaperBLAST's database that match '4.3.2.1' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_2049: argininosuccinate lyase
is similar to: | PaperBLAST |
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans | 47% id,
98% cov |
ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli
argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli | 46% id,
100% cov |
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis | 46% id,
96% cov |
ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme
Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp. | 45% id,
98% cov |
arg7 / RF|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe | 42% id,
98% cov |
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus | 43% id,
97% cov |
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens
ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens | 42% id,
97% cov |
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus | 42% id,
97% cov |
ARLY_YEAST / P04076: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Saccharomyces cerevisiae | 41% id,
97% cov |
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia | 39% id,
96% cov |
ARLY2_ANAPL / P24058: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin II; Delta-2 crystallin; EC 4.3.2.1 from Anas platyrhynchos | 39% id,
96% cov |
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser | 37% id,
96% cov |
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica | 33% id,
96% cov |
Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis | 35% id,
82% cov |
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron | 33% id,
83% cov |
CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp. | 31% id,
83% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
2152423-2154210 (frame +1) on Ga0059261_unitig_0_quiver.1
is similar to: | PaperBLAST |
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans
Also see hits to annotated proteins above | 47% id,
99% cov |
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis
Also see hits to annotated proteins above | 46% id,
98% cov |
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus
Also see hits to annotated proteins above | 42% id,
99% cov |
arg7 / RF|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe
Also see hits to annotated proteins above | 42% id,
99% cov |
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens
ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens
Also see hits to annotated proteins above | 42% id,
98% cov |
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus
Also see hits to annotated proteins above | 42% id,
98% cov |
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia
Also see hits to annotated proteins above | 39% id,
97% cov |
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser
Also see hits to annotated proteins above | 37% id,
97% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory