Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 13 curated entries in PaperBLAST's database that match '5.1.1.4'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2268: Cytochrome c2
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

54% id,
89% cov

Ga0059261_0551: Cytochrome c2
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

51% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory