Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 4 curated entries in PaperBLAST's database that match '5.3.3.7' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0523: Uncharacterized protein conserved in bacteria
is similar to:
PaperBLAST

Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis

37% id,
96% cov

ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis

44% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory