Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 2 curated entries in PaperBLAST's database that match 'L-2,4-diketo-3-deoxyrhamnonate hydrolase' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_2636: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) is similar to: | PaperBLAST |
SM_b21112: L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase from Sinorhizobium meliloti | 63% id, 98% cov |
8gsrA / Q1NEI7: Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Apo-form) | 61% id, 95% cov |
| Ga0059261_1678: Fumarylacetoacetate (FAA) hydrolase family is similar to: | PaperBLAST |
SM_b21112: L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase from Sinorhizobium meliloti | 31% id, 85% cov |
8gsrA / Q1NEI7: Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Apo-form) | 36% id, 65% cov |
| Ga0059261_1682: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) is similar to: | PaperBLAST |
8gsrA / Q1NEI7: Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Apo-form) | 30% id, 82% cov |
SM_b21112: L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase from Sinorhizobium meliloti | 27% id, 66% cov |
| Ga0059261_0508: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) is similar to: | PaperBLAST |
8gsrA / Q1NEI7: Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Apo-form) | 30% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory