Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 1 curated entries in PaperBLAST's database that match 'N-acetyl-LL-diaminopimelate aminotransferase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_2226: Aspartate/tyrosine/aromatic aminotransferase is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 34% id, 90% cov |
| Ga0059261_1288: Aspartate/tyrosine/aromatic aminotransferase is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 31% id, 97% cov |
| Ga0059261_1558: Aspartate/tyrosine/aromatic aminotransferase is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 29% id, 92% cov |
| Ga0059261_3110: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 23% id, 38% cov |
| Ga0059261_4093: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 27% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3247494-3248888 (frame +3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis | 23% id, 48% cov |
Lawrence Berkeley National Laboratory