Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%large' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_0007: carbamoyl-phosphate synthase, large subunit is similar to: | PaperBLAST |
carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum | 47% id, 50% cov |
carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum | 35% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4395051-4398482 (frame +3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum | 47% id, 39% cov |
4395142-4395765 (frame +1) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum | 37% id, 18% cov |
Lawrence Berkeley National Laboratory