Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_4243: carbamoyl-phosphate synthase, small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

46% id,
51% cov

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

38% id,
38% cov

Ga0059261_0006: carbamoyl-phosphate synthase, small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

46% id,
51% cov

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

38% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory