Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 2 curated entries in PaperBLAST's database that match 'citramalate isomerase small subunit' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_4225: 3-isopropylmalate dehydratase, small subunit is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 37% id, 73% cov |
| Ga0059261_3296: aconitate hydratase 1 is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 30% id, 66% cov |
| Ga0059261_4031: 2-isopropylmalate synthase, yeast type is similar to: | PaperBLAST |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 21% id, 59% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory