Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%beta' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_1453: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs is similar to: | PaperBLAST |
C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae | 30% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1530484-1533882 (frame -3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae | 30% id, 98% cov |
Lawrence Berkeley National Laboratory