Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1580: Glycosidases
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

32% id,
94% cov

Ga0059261_1778: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

AAP79503.1: sucrose hydrolase (CscA) (EC 3.2.1.26)

32% id,
89% cov

INVA_SOLLC / P29000: Acid beta-fructofuranosidase; Acid invertase; AI; Acid sucrose hydrolase; Vacuolar invertase; EC 3.2.1.26 from Solanum lycopersicum

28% id,
85% cov

scrB / Q9ZHJ7: sucrose hydrolase from Clostridium beijerinckii

24% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory