Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 2 curated entries in PaperBLAST's database that match '1.1.1.255' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS03320: alcohol dehydrogenase
is similar to:
PaperBLAST

MTD / Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens
Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens

45% id,
95% cov

BWI76_RS03140: alcohol dehydrogenase
is similar to:
PaperBLAST

MTD / Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens
Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens

34% id,
92% cov

BWI76_RS13800: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

MTD / Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens
Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens

29% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

647179-648282 (frame -2) on NZ_CP020657
is similar to:
PaperBLAST

MTD / Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens
Q38707: mannitol dehydrogenase (EC 1.1.1.255) from Apium graveolens
Also see hits to annotated proteins above

34% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory