Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 67 curated entries in PaperBLAST's database that match '1.1.1.42' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS11330: isocitrate dehydrogenase (NADP(+)) is similar to:	PaperBLAST
IDH_ECOLI / P08200: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Escherichia coli IcdE / b1136: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli icd / P08200: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli P08200: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42); [Isocitrate dehydrogenase (NADP+)] kinase (EC 2.7.11.5) from Escherichia coli	95% id, 100% cov
IDH_PSEAB / Q02NB5: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Pseudomonas aeruginosa	79% id, 99% cov
Q1XIQ8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea	76% id, 100% cov
IDH_COXBU / Q9ZH99: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Coxiella burnetii	74% id, 96% cov
icd / B2ZP83: isocitrate dehydrogenase subunit (EC 1.1.1.42) from Helicobacter pylori	70% id, 98% cov
IDH_BACSU / P39126: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bacillus subtilis icd / GB\|CAB14873.1: isocitrate dehydrogenase; EC 1.1.1.42 from Bacillus subtilis	67% id, 100% cov
O29610: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Archaeoglobus fulgidus	57% id, 99% cov
IDH_HALVD / D4GU92: Isocitrate dehydrogenase [NADP]; IDH; ICDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii	56% id, 98% cov
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui	54% id, 98% cov
Q9HLV8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermoplasma acidophilum	54% id, 97% cov
P96318: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus	49% id, 94% cov
Q9YE81: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix	49% id, 93% cov
A8YGS2: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Microcystis aeruginosa	54% id, 59% cov
icd / RF\|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus	35% id, 71% cov
A8YGS2: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Microcystis aeruginosa	60% id, 33% cov
More...

BWI76_RS10680: tartrate dehydrogenase is similar to:	PaperBLAST
O29610: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Archaeoglobus fulgidus	32% id, 93% cov
IDH_PSEAB / Q02NB5: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Pseudomonas aeruginosa	30% id, 92% cov
IDH_COXBU / Q9ZH99: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Coxiella burnetii	30% id, 91% cov
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui	30% id, 91% cov
Q1XIQ8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea	29% id, 93% cov
IDH_ECOLI / P08200: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Escherichia coli IcdE / b1136: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli icd / P08200: isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli P08200: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42); [Isocitrate dehydrogenase (NADP+)] kinase (EC 2.7.11.5) from Escherichia coli	28% id, 93% cov
Q9HLV8: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermoplasma acidophilum	29% id, 89% cov
IDH_HALVD / D4GU92: Isocitrate dehydrogenase [NADP]; IDH; ICDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii	28% id, 86% cov
icd / B2ZP83: isocitrate dehydrogenase subunit (EC 1.1.1.42) from Helicobacter pylori	28% id, 87% cov
icd / RF\|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus	33% id, 70% cov
IDH_BACSU / P39126: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bacillus subtilis icd / GB\|CAB14873.1: isocitrate dehydrogenase; EC 1.1.1.42 from Bacillus subtilis	37% id, 32% cov
IDH_BACSU / P39126: Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bacillus subtilis icd / GB\|CAB14873.1: isocitrate dehydrogenase; EC 1.1.1.42 from Bacillus subtilis	34% id, 31% cov
P96318: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus	33% id, 26% cov
More...

BWI76_RS04675: 3-isopropylmalate dehydrogenase is similar to:	PaperBLAST
IDH_HALVD / D4GU92: Isocitrate dehydrogenase [NADP]; IDH; ICDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii	28% id, 93% cov
P96318: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus	28% id, 90% cov
Q9YE81: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix	28% id, 90% cov
icd / RF\|YP_144801.1: isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus P33197: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus	35% id, 66% cov
icd / Q5UXA4: isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui	23% id, 93% cov
O29610: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Archaeoglobus fulgidus	23% id, 53% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory