Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.43' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS26960: bifunctional glyoxylate/hydroxypyruvate reductase B
is similar to:
PaperBLAST

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

60% id,
98% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

58% id,
98% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

58% id,
98% cov

More...

BWI76_RS27925: D-isomer specific 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

36% id,
98% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

37% id,
93% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

36% id,
94% cov

More...

BWI76_RS23920: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

35% id,
89% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

30% id,
100% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

36% id,
82% cov

More...

BWI76_RS26540: D-isomer specific 2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

33% id,
94% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

31% id,
95% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

28% id,
98% cov

More...

BWI76_RS14900: oxidoreductase
is similar to:
PaperBLAST

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

32% id,
89% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

34% id,
83% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

31% id,
87% cov

More...

BWI76_RS20390: erythronate-4-phosphate dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

33% id,
79% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

28% id,
82% cov

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

28% id,
78% cov

More...

BWI76_RS12790: lactate dehydrogenase
is similar to:
PaperBLAST

PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae

30% id,
78% cov

kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens

30% id,
78% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

30% id,
78% cov

BWI76_RS07875: dihydrofolate reductase
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

41% id,
53% cov

AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens

38% id,
53% cov

BWI76_RS21910: glyoxylate/hydroxypyruvate reductase A
is similar to:
PaperBLAST

BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans

31% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory