Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.58' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS15180: altronate oxidoreductase
is similar to:
PaperBLAST

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

87% id,
100% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

41% id,
99% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

36% id,
95% cov

BWI76_RS03945: altronate oxidoreductase
is similar to:
PaperBLAST

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

70% id,
100% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

43% id,
97% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

35% id,
94% cov

BWI76_RS19755: fructuronate reductase
is similar to:
PaperBLAST

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

27% id,
92% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

26% id,
95% cov

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

23% id,
99% cov

BWI76_RS05645: fructuronate reductase
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

26% id,
96% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

25% id,
96% cov

BWI76_RS15490: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

25% id,
95% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

28% id,
71% cov

BWI76_RS19345: D-arabinitol 4-dehydrogenase
is similar to:
PaperBLAST

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

21% id,
93% cov

BWI76_RS27165: mannitol-1-phosphate 5-dehydrogenase
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

26% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory