Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS12910: 3,4-dihydroxyphenylacetate 2,3-dioxygenase
is similar to:
PaperBLAST

Q4J6K0: catechol 2,3-dioxygenase (EC 1.13.11.2) from Sulfolobus acidocaldarius

39% id,
41% cov

V5W6K5: catechol 2,3-dioxygenase (EC 1.13.11.2) from Saccharolobus solfataricus

25% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory