Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 27 curated entries in PaperBLAST's database that match '1.13.11.27'.

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS00795: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

61% id,
95% cov

BWI76_RS11340: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

46% id,
69% cov

BWI76_RS14810: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

35% id,
88% cov

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

29% id,
80% cov

BWI76_RS16945: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

32% id,
89% cov

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

31% id,
89% cov

AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

31% id,
89% cov

More...

BWI76_RS13375: protease
is similar to:
PaperBLAST

Q9RSJ4: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Salvia miltiorrhiza

38% id,
39% cov

BWI76_RS19280: U32 family peptidase
is similar to:
PaperBLAST

Q9RSJ4: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Salvia miltiorrhiza

34% id,
25% cov

Q9RSJ4: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Salvia miltiorrhiza

33% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory