Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.

These curated entries have 126 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS07910: acireductone dioxygenase
is similar to:
PaperBLAST

MTND_KLEOX / Q9ZFE7: Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Klebsiella oxytoca
mtnD / Q9ZFE7: acireductone dioxygenase (EC 1.13.11.54; EC 1.13.11.53) from Klebsiella oxytoca
Q9ZFE7: acireductone dioxygenase (Ni2+-requiring) (EC 1.13.11.53); acireductone dioxygenase [iron(II)-requiring] (EC 1.13.11.54) from Klebsiella oxytoca

100% id,
100% cov

MTND_BACSU / O31669: Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Bacillus subtilis

33% id,
90% cov

MTND2_ORYSI / A2XCT8: Acireductone dioxygenase 2; Acireductone dioxygenase (Fe(2+)-requiring) 2; ARD' 2; Fe-ARD 2; Acireductone dioxygenase (Ni(2+)-requiring) 2; ARD 2; Ni-ARD 2; Submergence-induced protein 2A; EC 1.13.11.54; EC 1.13.11.53 from Oryza sativa
MTND2_ORYSJ / Q10RE5: Acireductone dioxygenase 2; Acireductone dioxygenase (Fe(2+)-requiring) 2; ARD' 2; Fe-ARD 2; Acireductone dioxygenase (Ni(2+)-requiring) 2; ARD 2; Ni-ARD 2; Submergence-induced protein 2A; EC 1.13.11.54; EC 1.13.11.53 from Oryza sativa

29% id,
53% cov

More...

BWI76_RS14200: protocatechuate 4,5-dioxygenase
is similar to:
PaperBLAST

GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida
gllA / Q88JX5: gallate dioxygenase monomer (EC 1.13.11.57) from Pseudomonas putida

71% id,
99% cov

desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis
Q5NTE5: gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis
G2IKE5: gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp.

55% id,
100% cov

PmdB / Q8RNX9: protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni

42% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory