Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 10 curated entries in PaperBLAST's database that match '1.14.13.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS04020: 4-hydroxybenzoate 3-monooxygenase
is similar to:
PaperBLAST

pobA / Q9R9T1: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas putida
Q9R9T1: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas putida

75% id,
100% cov

PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa

69% id,
100% cov

PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens
pobA / P00438: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas fluorescens

68% id,
100% cov

More...

BWI76_RS16925: 3-(3-hydroxyphenyl)propionate hydroxylase
is similar to:
PaperBLAST

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis

23% id,
84% cov

pobA / Q9R9T1: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas putida
Q9R9T1: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas putida

20% id,
83% cov

Q6SSJ6: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni

33% id,
17% cov

More...

BWI76_RS25320: glutamate synthase
is similar to:
PaperBLAST

pobA / F2JUE7: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Marinomonas mediterranea

28% id,
37% cov

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis

40% id,
16% cov

BWI76_RS04890: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens

30% id,
31% cov

pobA / Q9R9T1: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas putida
Q9R9T1: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas putida

28% id,
27% cov

BWI76_RS17535: rRNA metabolism protein
is similar to:
PaperBLAST

Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens

28% id,
28% cov

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis

33% id,
21% cov

PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens
pobA / P00438: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas fluorescens

33% id,
19% cov

More...

BWI76_RS14230: flavin monoamine oxidase family protein
is similar to:
PaperBLAST

PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens
pobA / P00438: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas fluorescens

57% id,
12% cov

PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa

57% id,
12% cov

Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens

57% id,
12% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory