Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 5 curated entries in PaperBLAST's database that match '1.2.1.20' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS05620: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

89% id,
100% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

81% id,
100% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

81% id,
100% cov

More...

BWI76_RS15205: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

77% id,
99% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
94% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
92% cov

More...

BWI76_RS03795: putative aldehyde dehydrogenase
is similar to:
PaperBLAST

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

41% id,
97% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

35% id,
94% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
94% cov

More...

BWI76_RS03865: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

40% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

40% id,
96% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

39% id,
97% cov

More...

BWI76_RS13210: aldehyde dehydrogenase
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

40% id,
97% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

40% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

38% id,
97% cov

More...

BWI76_RS13425: 1-pyrroline dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

38% id,
98% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

39% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

38% id,
98% cov

More...

BWI76_RS07615: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

37% id,
98% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

36% id,
99% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
98% cov

More...

BWI76_RS10695: aldehyde dehydrogenase PuuC
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

37% id,
98% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
100% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

35% id,
100% cov

More...

BWI76_RS12820: NAD-dependent phenylacetaldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
98% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
99% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

34% id,
99% cov

More...

BWI76_RS13455: salicylaldehyde dehydrogenase
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

34% id,
97% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

33% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

33% id,
97% cov

More...

BWI76_RS21985: aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

34% id,
97% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

33% id,
97% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

33% id,
97% cov

More...

BWI76_RS11680: succinylglutamate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

34% id,
95% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

33% id,
95% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

33% id,
95% cov

More...

BWI76_RS02840: methylmalonate-semialdehyde dehydrogenase (CoA acylating)
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

31% id,
98% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

30% id,
98% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

30% id,
97% cov

More...

BWI76_RS10795: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

31% id,
98% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

30% id,
93% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

29% id,
93% cov

More...

BWI76_RS03070: methylmalonate-semialdehyde dehydrogenase (CoA acylating)
is similar to:
PaperBLAST

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

31% id,
95% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

30% id,
93% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

30% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory