Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS05580: group 1 glycosyl transferase
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

30% id,
22% cov

BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)

27% id,
16% cov

AAM95943.1: sucrose synthase (Sus1) (EC 2.4.1.13)

31% id,
14% cov

More...

BWI76_RS27300: glucuronic acid transferase
is similar to:
PaperBLAST

BAA01108.1: sucrose synthase (Ss1) (EC 2.4.1.13)

24% id,
27% cov

E0Z1D0: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

25% id,
21% cov

Q84T18: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum

25% id,
21% cov

More...

BWI76_RS10030: glycosyl transferase
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

34% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory