Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 3 curated entries in PaperBLAST's database that match '2.6.1.113' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS14455: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

33% id,
90% cov

BWI76_RS07600: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

33% id,
88% cov

BWI76_RS24630: putrescine aminotransferase
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

28% id,
98% cov

BWI76_RS26375: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

29% id,
90% cov

BWI76_RS08755: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

28% id,
94% cov

BWI76_RS11670: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

26% id,
96% cov

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

29% id,
40% cov

BWI76_RS26000: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

27% id,
91% cov

BWI76_RS14020: aspartate aminotransferase family protein
is similar to:
PaperBLAST

SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa
spuC / Q9I6J2: putrescine--pyruvate aminotransferase (EC 2.6.1.113) from Pseudomonas aeruginosa
Q9I6J2: putrescine-pyruvate transaminase (EC 2.6.1.113) from Pseudomonas aeruginosa

28% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory