Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS04590: ribulokinase
is similar to:
PaperBLAST

ARAB_ECOLI / P08204: Ribulokinase; EC 2.7.1.16 from Escherichia coli
AraB / b0063: ribulokinase (EC 2.7.1.16) from Escherichia coli
araB: ribulokinase; EC 2.7.1.16 from Escherichia coli
araB / P08204: ribulokinase (EC 2.7.1.16) from Escherichia coli

88% id,
100% cov

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

48% id,
99% cov

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

48% id,
98% cov

More...

BWI76_RS19365: ribulokinase
is similar to:
PaperBLAST

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

27% id,
97% cov

BWI76_RS19340: xylulokinase
is similar to:
PaperBLAST

Q9KBQ3: ribulokinase (EC 2.7.1.16) from Alkalihalobacillus halodurans

24% id,
87% cov

BWI76_RS14890: carbohydrate kinase
is similar to:
PaperBLAST

ARAB_BACSU / P94524: Ribulokinase; EC 2.7.1.16 from Bacillus subtilis

24% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory