Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.5' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS00680: rhamnulokinase
is similar to:
PaperBLAST

BWI76_RS00680: Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis

100% id,
100% cov

RHAB_ECOLI / P32171: L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli
RhaB / b3904: rhamnulokinase (EC 2.7.1.5) from Escherichia coli
rhaB / P32171: rhamnulokinase (EC 2.7.1.5) from Escherichia coli

78% id,
100% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

78% id,
100% cov

BWI76_RS22930: L-fuculokinase
is similar to:
PaperBLAST

BWI76_RS00680: Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis

26% id,
88% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

28% id,
58% cov

RHAB_ECOLI / P32171: L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli
RhaB / b3904: rhamnulokinase (EC 2.7.1.5) from Escherichia coli
rhaB / P32171: rhamnulokinase (EC 2.7.1.5) from Escherichia coli

27% id,
58% cov

BWI76_RS24670: autoinducer-2 kinase
is similar to:
PaperBLAST

Dshi_2429: Rhamnulokinase RhaK in alpha-proteobacteria (EC 2.7.1.5) from Dinoroseobacter shibae

24% id,
90% cov

BWI76_RS00680: Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis

24% id,
44% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

23% id,
43% cov

More...

BWI76_RS07870: carbohydrate kinase
is similar to:
PaperBLAST

HSERO_RS22200: Rhamnulokinase (EC 2.7.1.5) from Herbaspirillum seropedicae

29% id,
51% cov

RHAB_ECOLI / P32171: L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli
RhaB / b3904: rhamnulokinase (EC 2.7.1.5) from Escherichia coli
rhaB / P32171: rhamnulokinase (EC 2.7.1.5) from Escherichia coli

27% id,
37% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

27% id,
37% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory