Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 19 curated entries in PaperBLAST's database that match '3.1.2.4'.

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS13115: 2,3-dehydroadipyl-CoA hydratase
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

45% id,
100% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

33% id,
47% cov

BWI76_RS13120: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

32% id,
99% cov

Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

29% id,
75% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

30% id,
66% cov

More...

BWI76_RS20065: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

33% id,
96% cov

AO353_25665: 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

29% id,
59% cov

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

25% id,
70% cov

More...

BWI76_RS20455: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

35% id,
73% cov

PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens

27% id,
57% cov

PS417_13835: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas simiae

30% id,
50% cov

More...

BWI76_RS01365: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

29% id,
85% cov

BWI76_RS23945: methylmalonyl-CoA decarboxylase
is similar to:
PaperBLAST

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

25% id,
68% cov

RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis

27% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory