Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 7 curated entries in PaperBLAST's database that match '3.5.3.8' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS08725: formimidoylglutamase
is similar to:
PaperBLAST

BWI76_RS08725: Formiminoglutamase (EC 3.5.3.8) from Klebsiella michiganensis

100% id,
100% cov

HUTGL_PSEAE / Q9HZ59: Formimidoylglutamase; Formiminoglutamase; Formiminoglutamate hydrolase; EC 3.5.3.8 from Pseudomonas aeruginosa

47% id,
98% cov

Sama_3201: Formiminoglutamase (EC 3.5.3.8) from Shewanella amazonensis

30% id,
76% cov

More...

BWI76_RS21925: agmatinase
is similar to:
PaperBLAST

HUTG_BACSU / P42068: Formimidoylglutamase; Formiminoglutamase; Formiminoglutamate hydrolase; N-formimino-L-glutamate formiminohydrolase; EC 3.5.3.8 from Bacillus subtilis

28% id,
86% cov

BWI76_RS17540: chlorohydrolase/aminohydrolase
is similar to:
PaperBLAST

Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13); formimidoylglutamase (EC 3.5.3.8) from Pseudomonas aeruginosa

24% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory