Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS08215: glucosamine-6-phosphate deaminase
is similar to:
PaperBLAST

NAGB_ECO57 / P0A760: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase; EC 3.5.99.6 from Escherichia coli
NAGB_ECOLI / P0A759: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase; EC 3.5.99.6 from Escherichia coli
GlmD / b0678: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Escherichia coli
nagB / PDB|1CD5: GlcN6P deaminase; EC 3.5.99.6 from Escherichia coli
nagB / P0A759: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Escherichia coli

95% id,
100% cov

E1C878: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Gallus gallus

61% id,
94% cov

GNPI2_HUMAN / Q8TDQ7: Glucosamine-6-phosphate isomerase 2; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52; EC 3.5.99.6 from Homo sapiens
Q8TDQ7: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Homo sapiens

60% id,
93% cov

More...

BWI76_RS00120: glucosamine-6-phosphate deaminase
is similar to:
PaperBLAST

nagB / A3CLX4: glucosamine-6-phosphate deaminase subunit (EC 3.5.99.6) from Streptococcus sanguinis

29% id,
99% cov

NAGB_BACSU / O35000: Glucosamine-6-phosphate deaminase 1; GlcN6P deaminase 1; GNPDA 1; Glucosamine-6-phosphate isomerase 1; EC 3.5.99.6 from Bacillus subtilis
O35000: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Bacillus subtilis

26% id,
99% cov

GNPI1_MOUSE / O88958: Glucosamine-6-phosphate isomerase 1; Glucosamine-6-phosphate deaminase 1; GNPDA 1; GlcN6P deaminase 1; Oscillin; EC 3.5.99.6 from Mus musculus

31% id,
85% cov

More...

BWI76_RS00165: glutamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens

29% id,
96% cov

Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp.

28% id,
98% cov

Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis

28% id,
98% cov

More...

BWI76_RS03975: glucosamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

28% id,
95% cov

BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans

27% id,
90% cov

CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus

29% id,
83% cov

More...

BWI76_RS00065: MurR/RpiR family transcriptional regulator
is similar to:
PaperBLAST

BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans

27% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory