Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 4 curated entries in PaperBLAST's database that match '3.7.1.26' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS05690: fumarylacetoacetate (FAA) hydrolase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

37% id,
97% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

33% id,
97% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

33% id,
97% cov

More...

BWI76_RS03870: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

43% id,
72% cov

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

39% id,
76% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

39% id,
73% cov

More...

BWI76_RS19580: FAA-hydrolase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

34% id,
81% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

36% id,
78% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

36% id,
72% cov

More...

BWI76_RS17770: isomerase/hydrolase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

39% id,
72% cov

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

37% id,
71% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

35% id,
72% cov

More...

BWI76_RS03875: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

27% id,
74% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

27% id,
72% cov

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

30% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory