Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 4 curated entries in PaperBLAST's database that match '3.7.1.9' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS16915: alpha/beta hydrolase fold protein
is similar to:
PaperBLAST

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

35% id,
91% cov

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

35% id,
91% cov

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

35% id,
90% cov

BWI76_RS19205: putative proline iminopeptidase
is similar to:
PaperBLAST

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

35% id,
45% cov

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

35% id,
45% cov

BWI76_RS13445: alpha/beta hydrolase
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

34% id,
40% cov

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

33% id,
36% cov

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

32% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory