Curated BLAST
Searching in Klebsiella michiganensis M5al (Koxy)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17'.
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query
BWI76_RS24175: ornithine decarboxylase
is similar to: | PaperBLAST |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 86% id,
100% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 71% id,
100% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli
SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 67% id,
98% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 58% id,
99% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 56% id,
96% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 55% id,
98% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 42% id,
100% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 39% id,
98% cov |
More... |
BWI76_RS07195: lysine decarboxylase CadA
is similar to: | PaperBLAST |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 31% id,
98% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id,
89% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 34% id,
85% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 34% id,
85% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli
SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 33% id,
87% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 32% id,
90% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 34% id,
83% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 30% id,
88% cov |
More... |
BWI76_RS05300: lysine decarboxylase LdcC
is similar to: | PaperBLAST |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 31% id,
95% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli
SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 31% id,
94% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli
P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 34% id,
86% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 32% id,
89% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 30% id,
95% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 32% id,
86% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 30% id,
87% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id,
59% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory