Curated BLAST
Searching in Klebsiella michiganensis M5al (Koxy)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query
BWI76_RS24175: ornithine decarboxylase is similar to: | PaperBLAST |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 86% id, 100% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 71% id, 100% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 67% id, 98% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 58% id, 99% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 56% id, 96% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 55% id, 98% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 42% id, 100% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 39% id, 98% cov |
More... |
BWI76_RS07195: lysine decarboxylase CadA is similar to: | PaperBLAST |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 31% id, 98% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id, 89% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 34% id, 85% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 34% id, 85% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 33% id, 87% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 32% id, 90% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 34% id, 83% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 30% id, 88% cov |
More... |
BWI76_RS05300: lysine decarboxylase LdcC is similar to: | PaperBLAST |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 31% id, 95% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli SpeF / b0693: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speF / P24169: inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 31% id, 94% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli speC / P21169: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli P21169: ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 34% id, 86% cov |
A0A1V3Y1D0: ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri | 32% id, 89% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 30% id, 95% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 32% id, 86% cov |
Q038E5: ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei | 30% id, 87% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 33% id, 59% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory