Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 6 curated entries in PaperBLAST's database that match '4.1.1.44' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS16120: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

43% id,
98% cov

Q6SJA7: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp.

43% id,
99% cov

Q9L5B1: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata

41% id,
93% cov

More...

BWI76_RS11340: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q6SJA7: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp.

34% id,
82% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

38% id,
59% cov

Q9L5B1: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata

35% id,
62% cov

More...

BWI76_RS16125: 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

39% id,
64% cov

BWI76_RS14810: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

A2FEX8: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Trichomonas vaginalis

23% id,
96% cov

Q6SJA7: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp.

29% id,
68% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

28% id,
63% cov

More...

BWI76_RS14800: non-heme chloroperoxidase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

22% id,
61% cov

BWI76_RS00795: carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

38% id,
26% cov

BWI76_RS08280: acyl-CoA esterase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

34% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory