Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS22915: fuculose phosphate aldolase
is similar to:
PaperBLAST

BWI76_RS22915: L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis

100% id,
100% cov

FUCA_ECOLI / P0AB87: L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli
Prd / b2800: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli
fucA / P0AB87: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli

92% id,
100% cov

F8D9F5: D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis

38% id,
99% cov

More...

BWI76_RS07865: methylthioribulose 1-phosphate dehydratase
is similar to:
PaperBLAST

FUCA_METJA / Q58813: L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii
MJ1418 / Q58813: fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii
Q58813: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii

25% id,
90% cov

BT1274: L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron

26% id,
79% cov

BWI76_RS12825: hypothetical protein
is similar to:
PaperBLAST

F8D9F5: D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis

24% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory