Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.44' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS03105: myo-inosose-2 dehydratase
is similar to:
PaperBLAST

IOLE_BACSU / P42416: Inosose dehydratase; 2-keto-myo-inositol dehydratase; 2KMI dehydratase; EC 4.2.1.44 from Bacillus subtilis
iolE / P42416: scyllo-inosose dehydratase (EC 4.2.1.44) from Bacillus subtilis

48% id,
98% cov

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

42% id,
93% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

40% id,
96% cov

More...

BWI76_RS10210: endonuclease
is similar to:
PaperBLAST

BPHYT_RS13920: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Burkholderia phytofirmans

45% id,
94% cov

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

45% id,
89% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

40% id,
99% cov

More...

BWI76_RS14050: AP endonuclease, family 2
is similar to:
PaperBLAST

PGA1_c07270: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Phaeobacter inhibens

38% id,
100% cov

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

31% id,
92% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

30% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory