Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 110 curated entries in PaperBLAST's database that match '4.3.1.1'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS00980: PLP-dependent threonine dehydratase
is similar to:
PaperBLAST

ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli
Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli
ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli
P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli

96% id,
100% cov

THDH_YEAST / P00927: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Saccharomyces cerevisiae

48% id,
89% cov

V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum

47% id,
88% cov

More...

BWI76_RS02330: aspartate ammonia-lyase
is similar to:
PaperBLAST

ASPA_ECOLI / P0AC38: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Escherichia coli
AspA / b4139: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli
aspA / P0AC38: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli
P0AC38: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli

91% id,
100% cov

Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni

57% id,
99% cov

Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa

58% id,
97% cov

More...

BWI76_RS22880: L-serine ammonia-lyase
is similar to:
PaperBLAST

SDHM_ECOLI / P30744: L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli
SdaB / b2797: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
sdaB / GB|AAC75839.1: L-serine dehydratase 2; EC 4.3.1.17 from Escherichia coli
sdaB / P30744: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
P30744: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

91% id,
100% cov

SdaA / b1814: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
sdaA / P16095: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
P16095: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

77% id,
100% cov

YhaQ / b4471: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
tdcG / P42630: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
P42630: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

72% id,
100% cov

More...

BWI76_RS17875: L-serine ammonia-lyase
is similar to:
PaperBLAST

SdaA / b1814: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
sdaA / P16095: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
P16095: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

88% id,
100% cov

SDHM_ECOLI / P30744: L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli
SdaB / b2797: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
sdaB / GB|AAC75839.1: L-serine dehydratase 2; EC 4.3.1.17 from Escherichia coli
sdaB / P30744: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
P30744: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

76% id,
100% cov

YhaQ / b4471: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
tdcG / P42630: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
P42630: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

73% id,
100% cov

More...

BWI76_RS27860: D-serine dehydratase
is similar to:
PaperBLAST

SDHD_ECOLI / P00926: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli
DsdA / b2366: D-serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli
dsdA / P00926: D-serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli
P00926: D-Serine ammonia-lyase (EC 4.3.1.18) from Escherichia coli

87% id,
100% cov

SDHD_ECOL6 / Q8FFF4: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli

87% id,
100% cov

Q8ZL08: D-Serine ammonia-lyase (EC 4.3.1.18) from Salmonella enterica

83% id,
100% cov

More...

BWI76_RS17505: PLP-dependent lyase/thiolase
is similar to:
PaperBLAST

DPAL_ECOLI / P66899: Diaminopropionate ammonia-lyase; DAPAL; 2,3-diaminopropionate ammonia-lyase; Alpha,beta-diaminopropionate ammonia-lyase; Diaminopropionatase; EC 4.3.1.15 from Escherichia coli
YgeX / b2871: 2,3-diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli
ygeX / P66899: 2,3-diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli
P66899: Diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli

82% id,
100% cov

DPAL_SALTY / P40817: Diaminopropionate ammonia-lyase; DAPAL; 2,3-diaminopropionate ammonia-lyase; Alpha,beta-diaminopropionate ammonia-lyase; Diaminopropionatase; EC 4.3.1.15 from Salmonella typhimurium
P40817: Diaminopropionate ammonia-lyase (EC 4.3.1.15) from Salmonella enterica

52% id,
94% cov

SDHL_HUMAN / P20132: L-serine dehydratase/L-threonine deaminase; SDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19 from Homo sapiens
SDS / P20132: L-serine dehydratase (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens
P20132: L-serine ammonia-lyase (EC 4.3.1.17) from Homo sapiens

24% id,
74% cov

More...

BWI76_RS14470: L-serine ammonia-lyase
is similar to:
PaperBLAST

SDHM_ECOLI / P30744: L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli
SdaB / b2797: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
sdaB / GB|AAC75839.1: L-serine dehydratase 2; EC 4.3.1.17 from Escherichia coli
sdaB / P30744: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli
P30744: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

71% id,
100% cov

SdaA / b1814: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
sdaA / P16095: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
P16095: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

71% id,
100% cov

YhaQ / b4471: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
tdcG / P42630: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli
P42630: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

66% id,
100% cov

More...

BWI76_RS16270: fumarate hydratase, class II
is similar to:
PaperBLAST

Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp.

41% id,
98% cov

Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa

43% id,
92% cov

ASPA_ECOLI / P0AC38: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Escherichia coli
AspA / b4139: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli
aspA / P0AC38: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli
P0AC38: aspartate ammonia-lyase (EC 4.3.1.1) from Escherichia coli

41% id,
94% cov

More...

BWI76_RS18360: aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein
is similar to:
PaperBLAST

O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii

41% id,
95% cov

Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum

24% id,
71% cov

BWI76_RS20640: cysteine synthase A
is similar to:
PaperBLAST

SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus

26% id,
93% cov

SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens
SDSL / Q96GA7: Serine dehydratase-like (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens
Q96GA7: L-serine ammonia-lyase (EC 4.3.1.17) from Homo sapiens

25% id,
92% cov

BWI76_RS20685: cysteine synthase B
is similar to:
PaperBLAST

TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens
Q74FW6: threonine ammonia-lyase (EC 4.3.1.19) from Geobacter sulfurreducens

27% id,
49% cov

BWI76_RS18885: nitrogen fixation regulatory protein
is similar to:
PaperBLAST

SdaA / b1814: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
sdaA / P16095: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli
P16095: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli

42% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory